Using Git-annex to enhance the MediaWiki file repository system
Git-annex is a great companion to MediaWiki’s built in file repository functionality.
Lightning talk
2025
Maintaining large datasets at scale
Finding and fixing defects that arise in automatically managed git-annex repositories.
Extending the Brain Imaging Data Structure specification to provenance metadata
Provenance allows BIDS dataset to hold information on how they were generated.
2024
Reproducibility vs. computational efficiency on HPC systems
HPC systems have particular hard- and software configurations that introduce specific challenges for the implementation of reproducible data processing workflows.
fMRI Pipelines on HPC with DataLad and ReproMan
In this lightning talk, I will share my experience using DataLad, git-annex and ReproMan to run software pipelines on hundreds of fMRI datasets on an HPC cluster.
Optimisation in Network Engineering: Challenges and Solutions in Research Data Management
In the complex realm of network engineering design, optimisation methods have been instrumental, using a range of components across different systems and scenarios.